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as far as i know there just isn't demand for one's own data like this. people have kinda tried, there's some weird web3 offerings that allegedly do this so you
by mylons 1y ago
as far as i know there just isn't demand for one's own data like this. people have kinda tried, there's some weird web3 offerings that allegedly do this so you can monetize your data but afaik nobody uses that.
i mentioned in an earlier comment i'd be happy to start this company if there were that kinda demand. it'd cost you around $1000 USD to get this done and get a hard drive mailed to you with raw data (fastq files).
EDIT: it probably would be cool if this kind of thing existed so consumers could shop their analysis around. it might actually open up some consumer bioinformatics startups
- mfld 1y agoI agree with the low demand for more expensive personal WGS. I think you can mostly get what you want with ySeq: currently 400$ for 90 GigaBases WGS sequencing, with the data sent to you via SD card. You can request immediate data deletion. Only genealogical analysis is included, everything else is DIY.
- FL33TW00D 1y agoThanks for the tip on ySeq. I think there is some sort of middle ground here. Although 99% of consumers don't care about privacy, it's an org risk as we saw with 23&Me. A consumer focused, privacy heavy but cloud based platform will emerge in the wake of 23&Me.
- FL33TW00D 1y agoySeq has a 5 month waiting list for WGS, any other suggestions?
- mylons 1y agowhat would you pay for this service? how quickly would you want the data? what format do you want the data in?
- FL33TW00D 1y ago399 from YSeq seems fine for 30x coverage. Gemini says a reasonable cost estimate from saliva to SNPs is $163.84 - $211.84 using Ultima $80 for sequencing (funny that sequencing is no longer the bottleneck on cost). FASTQ is fine but I'd prefer BINSEQ: https://github.com/ArcInstitute/binseq https://github.com/ArcInstitute/binseq. I'm writing my own pipeline from BINSEQ.
- deleted 1y ago[deleted]
- rolisz 1y agoIf you ever start that company, let me know (you can email any address at the domain listed in my profile, it's all an alias to my main address)