5 ms·
Do you have a citation for this? Because this is not my understanding.
by comstock 9y ago
Do you have a citation for this? Because this is not my understanding.
- searine 9y agoNo citation, just personal experience aligning the data and comparing it directly to a hiSeq run of the same DNA. I was able to get about 1-10% mutation rate, with a median of about 1.5%. Rate depending on quality of the run. In general it was on par with PacBio.
- daemonk 9y agoI can add to this with my anecdotal evidence. In my experience (looked at ~15gb of basecalled data total), there is a large amount of indel errors. The mismatch rate is much lower. But it's hard to calculate exactly the mismatch rate when the indel rate is so high.